DSpace

Accounting for environmental variation in co‐occurrence modelling reveals the importance of positive interactions in root‐associated fungal communities
(2020-07-04) Abrego, Nerea; Roslin, Tomas; Huotari, Tea; Tack, Ayco J.M.; Lindahl, Björn D.; Tikhonov, Gleb; Somervuo, Panu; Schmidt, Niels Martin; Ovaskainen, Otso; Tack, Ayco J. M.; University of Helsinki - Abrego, Nerea; University of Helsinki - Roslin, Tomas; University of Helsinki - Huotari, Tea; Stockholm Environment Institute - Tack, Ayco J.M.; Swedish University of Agricultural Sciences - Lindahl, Björn D.; Computer Science Department - Tikhonov, Gleb; University of Helsinki - Somervuo, Panu; Roskilde University - Schmidt, Niels Martin; University of Helsinki - Ovaskainen, Otso; Department of Ecology, Environment and Plant Sciences Stockholm University Stockholm Sweden* - Tack, Ayco J. M.
Alternative developmental and transcriptomic responses to host plant water limitation in a butterfly metapopulation
(2021-10-10) Kahilainen, Aapo; Oostra, Vicencio; Somervuo, Panu; Minard, Guillaume; Saastamoinen, Marjo; University of Helsinki - Kahilainen, Aapo; University of Liverpool - Oostra, Vicencio; University of Helsinki - Somervuo, Panu; University of Lyon System - Minard, Guillaume; University of Helsinki - Saastamoinen, Marjo
Data collected by fruit body– and DNA-based survey methods yield consistent species-to-species association networks in wood-inhabiting fungal communities
(2020-08-27) Saine, Sonja; Ovaskainen, Otso; Somervuo, Panu; Abrego, Nerea; University of Helsinki - Saine, Sonja; University of Helsinki - Ovaskainen, Otso; University of Helsinki - Somervuo, Panu; University of Helsinki - Abrego, Nerea
Data from: Animal Sound Identifier (ASI): software for automated identification of vocal animals
(2019-05-07) Ovaskainen, Otso; de Camargo, Ulisses Moliterno; Somervuo, Panu; University of Helsinki - Ovaskainen, Otso; University of Helsinki - de Camargo, Ulisses Moliterno; University of Helsinki - Somervuo, Panu
Data from: Carrion fly-derived DNA metabarcoding is an effective tool for mammal surveys: evidence from a known tropical mammal community
(2017-07-27) Rodgers, Torrey W.; Xu, Charles C. Y.; Giacalone, Jacalyn; Kapheim, Karen M.; Saltonstall, Kristin; Vargas, Marta; Yu, Douglas W.; Somervuo, Panu; McMillan, W. Owen; Jansen, Patrick A.; Smithsonian Tropical Research Institute - Rodgers, Torrey W.; University of Groningen - Xu, Charles C. Y.; Montclair State University - Giacalone, Jacalyn; Smithsonian Tropical Research Institute - Kapheim, Karen M.; Smithsonian Tropical Research Institute - Saltonstall, Kristin; Smithsonian Tropical Research Institute - Vargas, Marta; Kunming Institute of Zoology - Yu, Douglas W.; University of Helsinki - Somervuo, Panu; Smithsonian Tropical Research Institute - McMillan, W. Owen; Wageningen University & Research - Jansen, Patrick A.
Data from: Domain-specific neural networks improve automated bird sound recognition already with small amount of local data
(2022-09-28) Lauha, Patrik; Somervuo, Panu; Lehikoinen, Petteri; Geres, Lisa; Richter, Tobias; Seibold, Sebastian; Ovaskainen, Otso; University of Helsinki - Lauha, Patrik; University of Helsinki - Somervuo, Panu; University of Helsinki - Lehikoinen, Petteri; Goethe University Frankfurt - Geres, Lisa; Technical University Munich - Richter, Tobias; Technical University Munich - Seibold, Sebastian; University of Jyväskylä - Ovaskainen, Otso
Data from: Domain-specific neural networks improve automated bird sound recognition already with small amount of local data
(2022-09-28) Lauha, Patrik; Somervuo, Panu; Lehikoinen, Petteri; Geres, Lisa; Richter, Tobias; Seibold, Sebastian; Ovaskainen, Otso; University of Helsinki - Lauha, Patrik; University of Helsinki - Somervuo, Panu; University of Helsinki - Lehikoinen, Petteri; Goethe University Frankfurt - Geres, Lisa; Technical University Munich - Richter, Tobias; Technical University Munich - Seibold, Sebastian; University of Jyväskylä - Ovaskainen, Otso
Data from: Flight-induced changes in gene expression in the Glanville fritillary butterfly
(2015-08-26) Kvist, Jouni; Mattila, Anniina I. K.; Somervuo, Panu; Ahola, Virpi; Koskinen, Patrik; Paulin, Lars; Salmela, Leena; Fountain, Toby; Rastas, Pasi; Ruokolainen, Annukka; Taipale, Minna; Holm, Liisa; Auvinen, Petri; Lehtonen, Rainer; Frilander, Mikko J.; Hanski, Ilkka; Mattila, Anniina L. K.; University of Helsinki - Kvist, Jouni; University of Helsinki - Mattila, Anniina I. K.; University of Helsinki - Somervuo, Panu; University of Helsinki - Ahola, Virpi; University of Helsinki - Koskinen, Patrik; University of Helsinki - Paulin, Lars; University of Helsinki - Salmela, Leena; University of Helsinki - Fountain, Toby; University of Helsinki - Rastas, Pasi; University of Helsinki - Ruokolainen, Annukka; Karolinska Institute - Taipale, Minna; University of Helsinki - Holm, Liisa; University of Helsinki - Auvinen, Petri; University of Helsinki - Lehtonen, Rainer; University of Helsinki - Frilander, Mikko J.; University of Helsinki - Hanski, Ilkka; University of Helsinki - Mattila, Anniina L. K.
Data from: Give me a sample of air and I will tell which species are found from your region – molecular identification of fungi from airborne spore samples
(2018-01-04) Abrego, Nerea; Norros, Veera; Halme, Panu; Somervuo, Panu; Ali-Kovero, Heini; Ovaskainen, Otso; University of Helsinki - Abrego, Nerea; University of Helsinki - Norros, Veera; University of Jyväskylä - Halme, Panu; University of Helsinki - Somervuo, Panu; University of Helsinki - Ali-Kovero, Heini; University of Helsinki - Ovaskainen, Otso
Data from: PROTAX-fungi: a web-based tool for probabilistic taxonomic placement of fungal ITS sequences
(2019-05-29) Abarenkov, Kessy; Somervuo, Panu; Nilsson, R. Henrik; Kirk, Paul M.; Huotari, Tea; Abrego, Nerea; Ovaskainen, Otso; University of Tartu - Abarenkov, Kessy; University of Helsinki - Somervuo, Panu; University of Gothenburg - Nilsson, R. Henrik; Royal Botanic Gardens - Kirk, Paul M.; University of Helsinki - Huotari, Tea; University of Helsinki - Abrego, Nerea; University of Helsinki - Ovaskainen, Otso
Data from: Quantifying uncertainty of taxonomic placement in DNA barcoding and metabarcoding
(2017-12-09) Somervuo, Panu; Yu, Douglas W.; Xu, Charles C.Y.; Ji, YinQiu; Hultman, Jenni; Wirta, Helena; Ovaskainen, Otso; University of Helsinki - Somervuo, Panu; Kunming Institute of Zoology - Yu, Douglas W.; University of Groningen - Xu, Charles C.Y.; Kunming Institute of Zoology - Ji, YinQiu; University of Helsinki - Hultman, Jenni; University of Helsinki - Wirta, Helena; University of Helsinki - Ovaskainen, Otso
Data from: Scaling up the effects of inbreeding depression from individuals to metapopulations
(2019-05-31) Nonaka, Etsuko; Sirén, Jukka; Somervuo, Panu; Ruokolainen, Lasse; Ovaskainen, Otso; Hanski, Ilkka; University of Helsinki - Nonaka, Etsuko; University of Helsinki - Sirén, Jukka; University of Helsinki - Somervuo, Panu; University of Helsinki - Ruokolainen, Lasse; University of Helsinki - Ovaskainen, Otso; University of Helsinki - Hanski, Ilkka
Supplementary material 1 from: Parisy B, Schmidt NM, Wirta H, Stewart L, Pellissier L, Holben WE, Pannoni S, Somervuo P, Jones MM, Siren J, Vesterinen E, Ovaskainen O, Roslin T (2023) Ecological signals of arctic plant-microbe associations are consistent across eDNA and vegetation surveys. Metabarcoding and Metagenomics 7: e99979. https://doi.org/10.3897/mbmg.7.99979
(2023-08-11) Parisy, Bastien; Schmidt, Niels M.; Wirta, Helena; Stewart, Laerke; Pellissier, Loic; Holben, William E.; Pannoni, Sam; Somervuo, Panu; Jones, Mirkka M.; Siren, Jukka; Vesterinen, Eero; Ovaskainen, Otso; Roslin, Tomas; University of Helsinki, Helsinki, Finland - Parisy, Bastien; Aarhus University, Aarhus, Denmark - Schmidt, Niels M.; University of Helsinki, Helsinki, Finland - Wirta, Helena; University of South-Eastern Norway, Bø, Norway - Stewart, Laerke; Department of Environmental Systems Science, ETH Zürich, Zürich, Switzerland|Swiss Federal Research Institute WSL, Birmensdorf, Switzerland - Pellissier, Loic; University of Montana, Missoula, United States of America - Holben, William E.; University of Montana, Missoula, United States of America - Pannoni, Sam; University of Helsinki, Helsinki, Finland - Somervuo, Panu; University of Helsinki, Helsinki, Finland - Jones, Mirkka M.; University of Helsinki, Helsinki, Finland - Siren, Jukka; University of Turku, Turku, Finland - Vesterinen, Eero; Norwegian University of Science and Technology, Trondheim, Norway|University of Helsinki, Helsinki, Finland|University of Jyväskylä, Jyväskylä, Finland - Ovaskainen, Otso; Swedish University of Agricultural Sciences, Uppsala, Sweden|University of Helsinki, Helsinki, Finland - Roslin, Tomas
Supplementary material 1 from: Shumskaya M, Lorusso N, Patel U, Leigh M, Somervuo P, Schigel D (2023) MycoPins: a metabarcoding-based method to monitor fungal colonization of fine woody debris. MycoKeys 96: 77-95. https://doi.org/10.3897/mycokeys.96.101033
(2023-03-23) Shumskaya, Maria; Lorusso, Nicholas; Patel, Urvi; Leigh, Madison; Somervuo, Panu; Schigel, Dmitry; Kean University, Union, United States of America - Shumskaya, Maria; University of North Texas at Dallas, Dallas, United States of America|Kean University, Union, United States of America - Lorusso, Nicholas; Kean University, Union, United States of America - Patel, Urvi; Kean University, Union, United States of America - Leigh, Madison; University of Helsinki, Helsinki, Finland - Somervuo, Panu; University of Helsinki, Helsinki, Finland - Schigel, Dmitry
Supplementary material 2 from: Parisy B, Schmidt NM, Wirta H, Stewart L, Pellissier L, Holben WE, Pannoni S, Somervuo P, Jones MM, Siren J, Vesterinen E, Ovaskainen O, Roslin T (2023) Ecological signals of arctic plant-microbe associations are consistent across eDNA and vegetation surveys. Metabarcoding and Metagenomics 7: e99979. https://doi.org/10.3897/mbmg.7.99979
(2023-08-11) Parisy, Bastien; Schmidt, Niels M.; Wirta, Helena; Stewart, Laerke; Pellissier, Loic; Holben, William E.; Pannoni, Sam; Somervuo, Panu; Jones, Mirkka M.; Siren, Jukka; Vesterinen, Eero; Ovaskainen, Otso; Roslin, Tomas; University of Helsinki, Helsinki, Finland - Parisy, Bastien; Aarhus University, Aarhus, Denmark - Schmidt, Niels M.; University of Helsinki, Helsinki, Finland - Wirta, Helena; University of South-Eastern Norway, Bø, Norway - Stewart, Laerke; Department of Environmental Systems Science, ETH Zürich, Zürich, Switzerland|Swiss Federal Research Institute WSL, Birmensdorf, Switzerland - Pellissier, Loic; University of Montana, Missoula, United States of America - Holben, William E.; University of Montana, Missoula, United States of America - Pannoni, Sam; University of Helsinki, Helsinki, Finland - Somervuo, Panu; University of Helsinki, Helsinki, Finland - Jones, Mirkka M.; University of Helsinki, Helsinki, Finland - Siren, Jukka; University of Turku, Turku, Finland - Vesterinen, Eero; Norwegian University of Science and Technology, Trondheim, Norway|University of Helsinki, Helsinki, Finland|University of Jyväskylä, Jyväskylä, Finland - Ovaskainen, Otso; Swedish University of Agricultural Sciences, Uppsala, Sweden|University of Helsinki, Helsinki, Finland - Roslin, Tomas