Data from: The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes

dc.contributor.affiliationClark University - Floudas, Dimitrios
dc.contributor.affiliationClark University - Binder, Manfred
dc.contributor.affiliationUnited States Department of Energy - Barry, Kerrie
dc.contributor.affiliationUniversity of Minnesota - Blanchette, Robert A.
dc.contributor.affiliationArchitecture et Fonction des Macromolécules Biologiques - Henrissat, Bernard
dc.contributor.affiliationCentro de Investigaciones Biológicas - Martínez, Angel T.
dc.contributor.affiliationUnited States Department of Energy - Ortillar, Robert
dc.contributor.affiliationOregon State University - Spatafora, Joseph W.
dc.contributor.affiliationUniversity of Cincinnati - Yadav, Jagjit S.
dc.contributor.affiliationUnited States Department of Energy - Aerts, Andrea
dc.contributor.affiliationUtrecht University - Benoit, Isabelle
dc.contributor.affiliationOregon State University - Boyd, Alex
dc.contributor.affiliationClark University - Carlson, Alexis
dc.contributor.affiliationUnited States Department of Energy - Copeland, Alex
dc.contributor.affiliationArchitecture et Fonction des Macromolécules Biologiques - Coutinho, Pedro M.
dc.contributor.affiliationUtrecht University - de Vries, Ronald P.
dc.contributor.affiliationUniversity of Zaragoza - Ferreira, Patricia
dc.contributor.affiliationDuke University Hospital - Findley, Keisha
dc.contributor.affiliationUnited States Department of Energy - Foster, Brian
dc.contributor.affiliationForest Products Laboratory - Gaskell, Jill
dc.contributor.affiliationClark University - Glotzer, Dylan
dc.contributor.affiliationUniversity of Warsaw - Górecki, Paweł
dc.contributor.affiliationDuke University Hospital - Heitman, Joseph
dc.contributor.affiliationOregon State University - Hesse, Cedar
dc.contributor.affiliationUniversity of Tokyo - Hori, Chiaki
dc.contributor.affiliationUniversity of Tokyo - Igarashi, Kiyohiko
dc.contributor.affiliationUniversity of Minnesota - Jurgens, Joel A.
dc.contributor.affiliationClark University - Kallen, Nathan
dc.contributor.affiliationForest Products Laboratory - Kersten, Phil
dc.contributor.affiliationInteractions Arbres-Microorganismes - Kohler, Annegret
dc.contributor.affiliationUniversity of Göttingen - Kües, Ursula
dc.contributor.affiliationDepartment of Plant Biology - Kumar, T. K. Arun
dc.contributor.affiliationUnited States Department of Energy - Kuo, Alan
dc.contributor.affiliationUnited States Department of Energy - LaButti, Kurt
dc.contributor.affiliationPontifical Catholic University of Chile - Larrondo, Luis F.
dc.contributor.affiliationUnited States Department of Energy - Lindquist, Erika
dc.contributor.affiliationClark University - Ling, Albee
dc.contributor.affiliationArchitecture et Fonction des Macromolécules Biologiques - Lombard, Vincent
dc.contributor.affiliationUnited States Department of Energy - Lucas, Susan
dc.contributor.affiliationUniversity of Helsinki - Lundell, Taina
dc.contributor.affiliationClark University - Martin, Rachael
dc.contributor.affiliationDepartment of Plant Biology - McLaughlin, David J.
dc.contributor.affiliationConcordia University - Morgenstern, Ingo
dc.contributor.affiliationInteractions Arbres-Microorganismes - Morin, Emanuelle
dc.contributor.affiliationInteractions Arbres-Microorganismes - Murat, Claude
dc.contributor.affiliationUnited States Department of Energy - Nolan, Matt
dc.contributor.affiliationUnited States Department of Energy - Ohm, Robin A.
dc.contributor.affiliationRoyal Netherlands Academy of Arts and Sciences - Patyshakuliyeva, Aleksandrina
dc.contributor.affiliationVanderbilt University - Rokas, Antonis
dc.contributor.affiliationCentro de Investigaciones Biológicas - Ruiz-Dueñas, Francisco J.
dc.contributor.affiliationUniversity of Wisconsin Biotechnology Center, Madison, WI 53726, USA.* - Sabat, Grzegorz
dc.contributor.affiliationUnited States Department of Energy - Salamov, Asaf
dc.contributor.affiliationUniversity of Tokyo - Samejima, Masahiro
dc.contributor.affiliationHudsonAlpha Institute for Biotechnology - Schmutz, Jeremy
dc.contributor.affiliationVanderbilt University - Slot, Jason C.
dc.contributor.affiliationForest Products Laboratory - St. John, Franz
dc.contributor.affiliationSwedish University of Agricultural Sciences - Stenlid, Jan
dc.contributor.affiliationUnited States Department of Energy - Sun, Hui
dc.contributor.affiliationDuke University Hospital - Sun, Sheng
dc.contributor.affiliationUniversity of Cincinnati - Syed, Khajamohiddin
dc.contributor.affiliationConcordia University - Tsang, Adrian
dc.contributor.affiliationRoyal Netherlands Academy of Arts and Sciences - Wiebenga, Ad
dc.contributor.affiliationClark University - Young, Darcy
dc.contributor.affiliationGenetics and Microbiology Research Group, Public University of Navarre, 31006 Pamplona, Spain.* - Pisabarro, Antonio
dc.contributor.affiliationSwansea University - Eastwood, Daniel C.
dc.contributor.affiliationInteractions Arbres-Microorganismes - Martin, Francis
dc.contributor.affiliationForest Products Laboratory - Cullen, Dan
dc.contributor.affiliationUnited States Department of Energy - Grigoriev, Igor V.
dc.contributor.affiliationClark University - Hibbett, David S.
dc.contributor.authorFloudas, Dimitrios
dc.contributor.authorBinder, Manfred
dc.contributor.authorRiley, Robert
dc.contributor.authorBarry, Kerrie
dc.contributor.authorBlanchette, Robert A.
dc.contributor.authorHenrissat, Bernard
dc.contributor.authorMartínez, Angel T.
dc.contributor.authorOrtillar, Robert
dc.contributor.authorSpatafora, Joseph W.
dc.contributor.authorYadav, Jagjit S.
dc.contributor.authorAerts, Andrea
dc.contributor.authorBenoit, Isabelle
dc.contributor.authorBoyd, Alex
dc.contributor.authorCarlson, Alexis
dc.contributor.authorCopeland, Alex
dc.contributor.authorCoutinho, Pedro M.
dc.contributor.authorde Vries, Ronald P.
dc.contributor.authorFerreira, Patricia
dc.contributor.authorFindley, Keisha
dc.contributor.authorFoster, Brian
dc.contributor.authorGaskell, Jill
dc.contributor.authorGlotzer, Dylan
dc.contributor.authorGórecki, Paweł
dc.contributor.authorHeitman, Joseph
dc.contributor.authorHesse, Cedar
dc.contributor.authorHori, Chiaki
dc.contributor.authorIgarashi, Kiyohiko
dc.contributor.authorJurgens, Joel A.
dc.contributor.authorKallen, Nathan
dc.contributor.authorKersten, Phil
dc.contributor.authorKohler, Annegret
dc.contributor.authorKües, Ursula
dc.contributor.authorKumar, T. K. Arun
dc.contributor.authorKuo, Alan
dc.contributor.authorLaButti, Kurt
dc.contributor.authorLarrondo, Luis F.
dc.contributor.authorLindquist, Erika
dc.contributor.authorLing, Albee
dc.contributor.authorLombard, Vincent
dc.contributor.authorLucas, Susan
dc.contributor.authorLundell, Taina
dc.contributor.authorMartin, Rachael
dc.contributor.authorMcLaughlin, David J.
dc.contributor.authorMorgenstern, Ingo
dc.contributor.authorMorin, Emanuelle
dc.contributor.authorMurat, Claude
dc.contributor.authorNagy, László G.
dc.contributor.authorNolan, Matt
dc.contributor.authorOhm, Robin A.
dc.contributor.authorPatyshakuliyeva, Aleksandrina
dc.contributor.authorRokas, Antonis
dc.contributor.authorRuiz-Dueñas, Francisco J.
dc.contributor.authorSabat, Grzegorz
dc.contributor.authorSalamov, Asaf
dc.contributor.authorSamejima, Masahiro
dc.contributor.authorSchmutz, Jeremy
dc.contributor.authorSlot, Jason C.
dc.contributor.authorSt. John, Franz
dc.contributor.authorStenlid, Jan
dc.contributor.authorSun, Hui
dc.contributor.authorSun, Sheng
dc.contributor.authorSyed, Khajamohiddin
dc.contributor.authorTsang, Adrian
dc.contributor.authorWiebenga, Ad
dc.contributor.authorYoung, Darcy
dc.contributor.authorPisabarro, Antonio
dc.contributor.authorEastwood, Daniel C.
dc.contributor.authorMartin, Francis
dc.contributor.authorCullen, Dan
dc.contributor.authorGrigoriev, Igor V.
dc.contributor.authorHibbett, David S.
dc.coverage.spatialworld wide
dc.date.accessioned2025-03-24T15:26:29Z
dc.date.issued2012-06-29
dc.date.issued2012-06-29
dc.descriptionWood is a major pool of organic carbon that is highly resistant to decay, owing largely to the presence of lignin. The only organisms capable of substantial lignin decay are white rot fungi in the Agaricomycetes, which also contains non–lignin-degrading brown rot and ectomycorrhizal species. Comparative analyses of 31 fungal genomes (12 generated for this study) suggest that lignin-degrading peroxidases expanded in the lineage leading to the ancestor of the Agaricomycetes, which is reconstructed as a white rot species, and then contracted in parallel lineages leading to brown rot and mycorrhizal species. Molecular clock analyses suggest that the origin of lignin degradation might have coincided with the sharp decrease in the rate of organic carbon burial around the end of the Carboniferous period.
dc.identifierhttps://doi.org/10.5061/dryad.5k3t47p0
dc.identifier.urihttps://hydatakatalogi-test-24.it.helsinki.fi/handle/123456789/11435
dc.rightsOpen
dc.rights.licensecc-zero
dc.subjectAscomycota
dc.subjectAuriculariales
dc.subjectHymenochaetales
dc.subjectwhite rot
dc.subjectcarbon cycle
dc.subjectGloeophyllales
dc.subjectBasidiomycota
dc.subjectclass II peroxidases
dc.subjectTree Reconciliation
dc.subjectCorticiales
dc.subjectmolecular clocks
dc.subjectCryogenian to present
dc.subjectPolyporales
dc.subjectRussulales
dc.subjectBoletales
dc.subjectDikarya
dc.subjectAgaricomycotina
dc.subjectAgaricomycetes
dc.subjectwood decay enzymes
dc.subjectligninolytic enzymes
dc.subjectAgaricales
dc.titleData from: The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes
dc.typedataset
dc.typedataset
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